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  5. SymbC1.scaffold934.5

SymbC1.scaffold934.5 (934.5)


Aliases : 934.5

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold934.5
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001254.15 tig00001254_g7820.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021127.83 tig00021127_g18760.t1 No description available 0.02 OrthoFinder
Cre10.g432550 30790677, KCN2 No description available 0.02 OrthoFinder
SymbC1.scaffold96.6 96.6 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002503703.1 MICPUN_60381, 60381 Voltage-gated ion channel superfamily 0.03 OrthoFinder
lcl|BLLF01000944.1_cds_GFH16094.1_10571 HaLaN_12446, GFH16094 Ion_trans domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001184.1_cds_GFH17670.1_12147 HaLaN_14352, GFH17670 Ion_trans domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 220 425
No external refs found!