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  5. SymbC1.scaffold9326.1

SymbC1.scaffold9326.1 (9326.1)


Aliases : 9326.1

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9326.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cre07.g330400 30774406, KCN1 No description available 0.02 OrthoFinder
Cre10.g432550 30790677, KCN2 No description available 0.03 OrthoFinder
SymbC1.scaffold130.9 130.9 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold418.1 418.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold58.1 58.1 EF-hand domain pair; Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_003056570.1 MicpuC2_65205, 65205 Voltage-gated ion channel superfamily 0.01 OrthoFinder
XM_003059284.1 MicpuC2_17881, 17881 Voltage-gated ion channel superfamily 0.01 OrthoFinder
XM_003059863.1 MicpuC2_59734, 59734 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_003063127.1 MicpuC2_52954, 52954 Voltage-gated ion channel superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 358 415
IPR005821 Ion_trans_dom 116 329
No external refs found!