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  5. SymbC1.scaffold9.407

SymbC1.scaffold9.407 (9.407)


Aliases : 9.407

Description : Beta-lactamase enzyme family; Domain of unknown function DUF58; ATPase, AAA-3; Aerotolerance regulator, N-terminal; von Willebrand factor, type A; ChlI/MoxR, AAA lid domain [Interproscan].


Gene families : OG_01_0000231 (OrthoFinder) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9.407
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.2415 1.2415 Macrocin-O-methyltransferase; PFTB repeat [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1.38 1.38 von Willebrand factor, type A; Aerotolerance regulator,... 0.01 OrthoFinder
SymbC1.scaffold1.888 1.888 Pyrrolo-quinoline quinone repeat; RNA polymerase... 0.01 OrthoFinder
SymbC1.scaffold16.193 16.193 von Willebrand factor, type A; Aerotolerance regulator,... 0.04 OrthoFinder
SymbC1.scaffold16.194 16.194 ATPase, AAA-3; Domain of unknown function DUF58;... 0.03 OrthoFinder
SymbC1.scaffold2.1303 2.1303 Aerotolerance regulator, N-terminal; von Willebrand... 0.05 OrthoFinder
SymbC1.scaffold2.1498 2.1498 Domain of unknown function DUF58; ATPase, AAA-3;... 0.03 OrthoFinder
SymbC1.scaffold22.285 22.285 Transposase IS3/IS911family; Integrase, catalytic core;... 0.05 OrthoFinder
SymbC1.scaffold32647.1 32647.1 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4.72 4.72 Protein of unknown function (DUF4381; von Willebrand... 0.04 OrthoFinder
SymbC1.scaffold5.923 5.923 Domain of unknown function DUF58; Pyrrolo-quinoline... 0.03 OrthoFinder
SymbC1.scaffold9.400 9.400 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9.402 9.402 Domain of unknown function DUF58 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9.403 9.403 PFTB repeat; Glycosyl hydrolase family 98, putative... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0008614 pyridoxine metabolic process IEP Enrichment
BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002035 VWF_A 1091 1211
IPR011703 ATPase_AAA-3 48 181
IPR041628 ChlI/MoxR_AAA_lid 256 324
IPR002881 DUF58 865 945
IPR024163 Aerotolerance_reg_N 1006 1079
No external refs found!