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  5. SymbC1.scaffold8747.3

SymbC1.scaffold8747.3 (8747.3)


Aliases : 8747.3

Description : Ammonium transporter AmtB-like domain [Interproscan].


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8747.3
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre03.g159254 30787272 Solute transport.channels.AMT family.ammonium... 0.02 OrthoFinder
Cre06.g293051 30778481 Solute transport.channels.AMT family.ammonium... 0.01 OrthoFinder
Dusal.1183s00002.1 33200831 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
EOD36839 No alias Putative ammonium transporter [Ensembl]. 0.02 OrthoFinder
PTI_10G00390.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
PTI_11G00420.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
Sro565_g167610.1 Contig2465.g20186 Ammonium transporter 1 member 0.01 OrthoFinder
SymbC1.scaffold564.4 564.4 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_90363 90363 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 1 167
IPR024041 NH4_transpt_AmtB-like_dom 165 300
No external refs found!