Cpa|evm.model.tig00020685.31 (tig00020685_g12947.t1)

Aliases : tig00020685_g12947.t1

Description : ABC transporter G family member 22 OS=Arabidopsis thaliana

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020685.31
Cluster	HCCA: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000692.51	tig00000692_g3247.t1	ABC transporter G family member 13 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00020614.26	tig00020614_g12136.t1	ABC transporter G family member 9 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cre12.g527100	30793034	ABC transporter G family member 28 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cz03g11100.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
Cz12g02110.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
PTI_24G00260.1	No alias	ABC transporter-like; ABC-2 type transporter [Interproscan].	0.01	OrthoFinder
Sro1485_g276510.1	Contig4245.g32132	Putative white-brown complex homolog protein 30	0.01	OrthoFinder
Sro16_g011820.1	Contig916.g9619	Putative white-brown complex homolog protein 30	0.02	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39060.1_2535	PRW39060	Abc transporter G family	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	604	792
IPR003439	ABC_transporter-like_ATP-bd	299	421

External Links

No external refs found!