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  5. SymbC1.scaffold8469.1

SymbC1.scaffold8469.1 (8469.1)


Aliases : 8469.1

Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8469.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre16.g692901 30778072 RNA biosynthesis.organelle machineries.RNA polymerase... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004336 galactosylceramidase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
BP GO:0006677 glycosylceramide metabolic process IEP Enrichment
BP GO:0006681 galactosylceramide metabolic process IEP Enrichment
BP GO:0006683 galactosylceramide catabolic process IEP Enrichment
BP GO:0006687 glycosphingolipid metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
BP GO:0019374 galactolipid metabolic process IEP Enrichment
BP GO:0019376 galactolipid catabolic process IEP Enrichment
BP GO:0019377 glycolipid catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030149 sphingolipid catabolic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046466 membrane lipid catabolic process IEP Enrichment
BP GO:0046477 glycosylceramide catabolic process IEP Enrichment
BP GO:0046479 glycosphingolipid catabolic process IEP Enrichment
BP GO:0046514 ceramide catabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 30 220
IPR011629 Cbl_biosynth_CobW-like_C 281 355
No external refs found!