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  5. SymbC1.scaffold8446.2

SymbC1.scaffold8446.2 (8446.2)


Aliases : 8446.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8446.2
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10275.2 10275.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1240.1 1240.1 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold1779.3 1779.3 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold2188.7 2188.7 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold563.11 563.11 Ion transport domain [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold5818.2 5818.2 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold7338.1 7338.1 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold7358.2 7358.2 EF-hand domain pair; Ion transport domain [Interproscan]. 0.12 OrthoFinder
SymbC1.scaffold939.1 939.1 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold945.1 945.1 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 136 383
No external refs found!