SymbC1.scaffold7899.1 (7899.1)

Aliases : 7899.1

Description : Ammonium transporter AmtB-like domain [Interproscan].

Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold7899.1
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
Cz03g40260.t1	No alias	Ammonium transporter AmtB-like domain [Interproscan].	0.01	OrthoFinder
EOD32919	No alias	Ammonium transporter [Ensembl].	0.01	OrthoFinder
Sro1521_g279450.1	Contig1605.g14549	Ammonium transporter 1 member	0.01	OrthoFinder
SymbC1.scaffold3067.2	3067.2	Ammonium transporter AmtB-like domain [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold3285.4	3285.4	Ammonium transporter AmtB-like domain [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold564.4	564.4	Ammonium transporter AmtB-like domain [Interproscan].	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008519	ammonium transmembrane transporter activity	IEA	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015696	ammonium transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
MF	GO:0008810	cellulase activity	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0018298	protein-chromophore linkage	IEP	Enrichment
CC	GO:0030076	light-harvesting complex	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR024041	NH4_transpt_AmtB-like_dom	4	349

External Links

No external refs found!