SymbC1.scaffold774.4 (774.4)

Aliases : 774.4

Description : ABC transporter-like; Domain of unknown function DUF155; ABC transporter type 1, transmembrane domain [Interproscan].

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold774.4
Cluster HCCA: Cluster_860

Target Alias Description ECC score Gene Family Method Actions
EOD11711 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
Vocar.0001s1440.1 32884741 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Vocar.0028s0139.1 32895550 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497019.1_748 KAA8497019 Multidrug resistance protein 1B 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494946.1_3476 KAA8494946 Multidrug resistance protein 1B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1150 1367
IPR003439 ABC_transporter-like_ATP-bd 1436 1584
IPR003734 DUF155 465 657
No external refs found!