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  5. SymbC1.scaffold7610.1

SymbC1.scaffold7610.1 (7610.1)


Aliases : 7610.1

Description : FAD-binding domain [Interproscan].


Gene families : OG_01_0000193 (OrthoFinder) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold7610.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 No description available 0.01 OrthoFinder
EOD29946 No alias Zeaxanthin epoxidase [Ensembl]. 0.02 OrthoFinder
Sro665_g183770.1 Contig1678.g15070 Zeaxanthin epoxidase, chloroplastic 0.01 OrthoFinder
TP02G04500.1 No alias FAD-binding domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56841 56841 FAD-binding domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1451.1 32885643 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002938 FAD-bd 94 294
IPR002938 FAD-bd 407 463
No external refs found!