SymbC1.scaffold7591.1 (7591.1)

Aliases : 7591.1

Description : C-5 cytosine methyltransferase; ATPase, AAA-type, core [Interproscan].

Gene families : OG_01_0007846 (OrthoFinder) Phylogenetic Tree(s): OG0007846_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold7591.1
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre16.g676350	30777384	Cell division cycle protein 48 homolog OS=Glycine max	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	1853	1887
IPR001525	C5_MeTfrase	1052	1184

External Links

No external refs found!