SymbC1.scaffold733.8 (733.8)

Aliases : 733.8

Description : PAS fold; Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; Adenylyl cyclase class-3/4/guanylyl cyclase [Interproscan].

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold733.8
Cluster HCCA: Cluster_862

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.03 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.03 OrthoFinder
Sro2374_g325320.1 Contig2298.g19021 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009190 cyclic nucleotide biosynthetic process IEA Interproscan
BP GO:0035556 intracellular signal transduction IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
InterPro domains Description Start Stop
IPR013767 PAS_fold 26 87
IPR003594 HATPase_C 254 359
IPR001789 Sig_transdc_resp-reg_receiver 449 563
IPR001054 A/G_cyclase 622 764
No external refs found!