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  5. Cpa|evm.model.tig00020660.25

Cpa|evm.model.tig00020660.25 (tig00021501_g21945.t1)


Aliases : tig00021501_g21945.t1

Description : Probable histidine kinase 3 OS=Oryza sativa subsp. indica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020660.25
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00000145.25 tig00000145_g8821.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.01 OrthoFinder
Cpa|evm.model.tig00000480.52 tig00000480_g1320.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.08 OrthoFinder
Cpa|evm.model.tig00000605.24 tig00000605_g2490.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000615.4 tig00000615_g2530.t1 Probable histidine kinase 1 OS=Oryza sativa subsp. indica 0.05 OrthoFinder
Cpa|evm.model.tig00001178.2 tig00000788_g4091.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cpa|evm.model.tig00001215.7 tig00001215_g7570.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020538.55 tig00020538_g10363.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020553.263 tig00020553_g10749.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00020554.106 tig00020554_g10883.t2 No description available 0.18 OrthoFinder
Cpa|evm.model.tig00020660.52 tig00020660_g12560.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020710.84 tig00020710_g13337.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00020903.6 tig00020903_g15073.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.01 OrthoFinder
Cpa|evm.model.tig00020965.42 tig00021501_g21945.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020999.10 tig00000743_g3872.t2 No description available 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 944 1010
No external refs found!