1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020629.149

Cpa|evm.model.tig00020629.149 (tig00020629_g12480.t1)


Aliases : tig00020629_g12480.t1

No description available


Gene families : OG_01_0000989 (OrthoFinder) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020629.149
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cz01g44150.t1 No alias DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.02 OrthoFinder
Cz07g03200.t1 No alias DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.01 OrthoFinder
Dusal.0160s00011.1 33188346 DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.01 OrthoFinder
EOD38818 No alias Smr domain [Interproscan]. 0.03 OrthoFinder
PTI_14G02910.1 No alias DNA mismatch repair protein MutS, C-terminal; Smr domain... 0.03 OrthoFinder
TP15G01230.1 No alias Smr domain; DNA mismatch repair protein MutS, C-terminal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 423 603
IPR002625 Smr_dom 874 944
No external refs found!