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  5. SymbC1.scaffold6515.3

SymbC1.scaffold6515.3 (6515.3)


Aliases : 6515.3

Description : EF-hand domain; EF-hand domain pair; Ion transport domain [Interproscan].


Gene families : OG_01_0001854 (OrthoFinder) Phylogenetic Tree(s): OG0001854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6515.3
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2015.2 2015.2 EF-hand domain; Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold462.4 462.4 EF-hand domain; Ion transport domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold64.4 64.4 EF-hand domain; Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 67 310
IPR002048 EF_hand_dom 333 354
No external refs found!