SymbC1.scaffold6483.3 (6483.3)


Aliases : 6483.3

Description : Hypothetical protein


Gene families : OG_01_0000928 (OrthoFinder) Phylogenetic Tree(s): OG0000928_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6483.3
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1058.1 1058.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold136.11 136.11 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold240.14 240.14 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold3012.5 3012.5 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold388.7 388.7 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!