1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold6437.4

SymbC1.scaffold6437.4 (6437.4)


Aliases : 6437.4

Description : ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6437.4
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Dusal.0852s00003.1 33185426 ABC transporter-like; ABC transporter type 1,... 0.04 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
SymbC1.scaffold550.5 550.5 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
Transcript_contig_55599 55599 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000878.1_cds_GFH15646.1_10123 HaLaN_11907, GFH15646 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002022.1_cds_GFH22355.1_16832 HaLaN_19808, GFH22355 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33948.1_2945 PRW33948 ABC transporter isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 80 343
No external refs found!