1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold6406.1

SymbC1.scaffold6406.1 (6406.1)


Aliases : 6406.1

Description : Glycosyl transferase, family 1; Starch synthase, catalytic domain [Interproscan].


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6406.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold511.1 511.1 Glycosyl transferase, family 1; Starch synthase,... 0.04 OrthoFinder
UNPLg00638.t1 No alias Starch synthase, catalytic domain; Glycosyl transferase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 513 752
IPR001296 Glyco_trans_1 805 959
No external refs found!