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  5. SymbC1.scaffold6393.4

SymbC1.scaffold6393.4 (6393.4)


Aliases : 6393.4

Description : Hypothetical protein


Gene families : OG_01_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6393.4
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold124.5 124.5 RHD3/Sey1 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2601.1 2601.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold625.6 625.6 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold6440.2 6440.2 E1-E2 ATPase; Cation-transporting P-type ATPase,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!