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  5. SymbC1.scaffold6250.3

SymbC1.scaffold6250.3 (6250.3)


Aliases : 6250.3

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0008793 (OrthoFinder) Phylogenetic Tree(s): OG0008793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6250.3
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold941.2 941.2 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 1413 1570
No external refs found!