Cpa|evm.model.tig00020616.33 (tig00020616_g12269.t1)

Aliases : tig00020616_g12269.t1

Description : E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana

Gene families : OG_01_0001050 (OrthoFinder) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020616.33
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method	Actions
PTI_20G00570.1	No alias	Regulator of chromosome condensation (RCC1) repeat; HECT...	0.01	OrthoFinder
XM_002508031.1	MICPUN_60437, 60437	E3 ubiquitin-protein ligase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004565	beta-galactosidase activity	IEP	Enrichment
MF	GO:0004664	prephenate dehydratase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
CC	GO:0009341	beta-galactosidase complex	IEP	Enrichment
MF	GO:0015925	galactosidase activity	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000408	Reg_chr_condens	22	72
IPR000408	Reg_chr_condens	75	131
IPR000569	HECT_dom	658	845
IPR000569	HECT_dom	875	917

External Links

No external refs found!