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  5. SymbC1.scaffold6108.2

SymbC1.scaffold6108.2 (6108.2)


Aliases : 6108.2

Description : Protein kinase domain; EF-hand domain [Interproscan].


Gene families : OG_01_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6108.2
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cre07.g328900 30774791 Protein modification.phosphorylation.CAMK kinase... 0.02 OrthoFinder
Dusal.0434s00004.1 33189072 EF-hand domain; Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Sro414_g138230.1 Contig453.g6098 MAP kinase-activated protein kinase 2 (Fragment) 0.02 OrthoFinder
Transcript_contig_78465 78465 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0020s0139.1 32886630 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57285.1_9124 PRW57285 Phosphoenolpyruvate carboxylase kinase 1-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 697 717
IPR000719 Prot_kinase_dom 307 579
IPR000719 Prot_kinase_dom 1 196
No external refs found!