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  5. SymbC1.scaffold609.10

SymbC1.scaffold609.10 (609.10)


Aliases : 609.10

Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold609.10
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021537.72 tig00021537_g22323.t1 ABC transporter G family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre07.g327800 30775067 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cz06g03250.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
EOD18864 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
OT_04G00620.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_14G01920.1 No alias ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
PTI_27G00030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro2078_g313670.1 Contig3499.g27148 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro380_g130710.1 Contig3948.g30263 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.03 OrthoFinder
lcl|BLLF01001387.1_cds_GFH18975.1_13452 HaLaN_15859, GFH18975 ABC transporter domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001486.1_cds_GFH19580.1_14057 HaLaN_16545, GFH19580 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01003509.1_cds_GFH27525.1_22002 HaLaN_25859, GFH27525 ABC transporter domain-containing protein 0.01 OrthoFinder
lcl|BLLF01008383.1_cds_GFH33351.1_27828 HaLaN_32709, GFH33351 ABC transporter domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 302 513
IPR003439 ABC_transporter-like_ATP-bd 19 169
No external refs found!