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  5. SymbC1.scaffold6085.2

SymbC1.scaffold6085.2 (6085.2)


Aliases : 6085.2

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0001854 (OrthoFinder) Phylogenetic Tree(s): OG0001854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6085.2
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1302.9 1302.9 EF-hand domain pair; Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold517.15 517.15 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 350 370
IPR002048 EF_hand_dom 396 416
IPR005821 Ion_trans_dom 86 329
No external refs found!