SymbC1.scaffold6050.1 (6050.1)


Aliases : 6050.1

Description : Hypothetical protein


Gene families : OG_01_0000213 (OrthoFinder) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6050.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
EOD41924 No alias Peptidase C2, calpain, catalytic domain; Peptidase C2,... 0.01 OrthoFinder
SymbC1.scaffold12816.1 12816.1 Peptidase C2, calpain, catalytic domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6364.3 6364.3 Peptidase C2, calpain, catalytic domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold651.13 651.13 Aprataxin and PNK-like factor, PBZ domain; Peptidase C2,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!