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  5. SymbC1.scaffold6009.4

SymbC1.scaffold6009.4 (6009.4)


Aliases : 6009.4

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000305 (OrthoFinder) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6009.4
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold11430.1 11430.1 EF-hand domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1370.3 1370.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold1615.2 1615.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold4004.2 4004.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold682.4 682.4 EF-hand domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 9 95
No external refs found!