SymbC1.scaffold588.8 (588.8)

Aliases : 588.8

Description : Glutamate synthase, alpha subunit, C-terminal; Tubulin-tyrosine ligase/Tubulin polyglutamylase; Glutamate synthase, central-N; Glutamate synthase domain; Glutamine amidotransferase type 2 domain [Interproscan].

Gene families : OG_01_0000413 (OrthoFinder) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold588.8
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g514050	30792611, GSF1	Nutrient uptake.nitrogen assimilation.ammonium...	0.03	OrthoFinder
Dusal.0806s00001.1	33190345	Glutamate synthase, central-N; Glutamine...	0.02	OrthoFinder
PTI_22G02630.1	No alias	Glutamine amidotransferase type 2 domain; Glutamate...	0.01	OrthoFinder
Sro1010_g230810.1	Contig4560.g34046	Glutamate synthase 1 [NADH], chloroplastic	0.01	OrthoFinder
Sro648_g181100.1	Contig423.g5681	Glutamate synthase 1 [NADH], chloroplastic	0.01	OrthoFinder
Sro785_g202150.1	Contig2407.g19693	Glutamate synthase 1 [NADH], chloroplastic	0.01	OrthoFinder
TP06G05930.1	No alias	Dihydroprymidine dehydrogenase domain II;...	0.02	OrthoFinder
Transcript_contig_79066	79066	Glutamate synthase, central-N; Glutamine...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006464	cellular protein modification process	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009966	regulation of signal transduction	IEP	Enrichment
BP	GO:0010646	regulation of cell communication	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
BP	GO:0023051	regulation of signaling	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR017932	GATase_2_dom	853	1273
IPR006982	Glu_synth_centr_N	1305	1588
IPR002489	Glu_synth_asu_C	2115	2288
IPR004344	TTL/TTLL_fam	256	486
IPR002932	Glu_synthdom	1657	2029

External Links

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SymbC1.scaffold588.8 (588.8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation