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Aliases : 587.1
Description : Polycystin cation channel, PKD1/PKD2 [Interproscan].
Gene families : OG_01_0001490 (OrthoFinder) Phylogenetic Tree(s): OG0001490_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold587.1 | |
| Cluster | HCCA: Cluster_169 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre17.g715300 | 30782850 | No description available | 0.01 | OrthoFinder | |
| Cz03g32240.t1 | No alias | Polycystin cation channel, PKD1/PKD2 [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0290s00022.1 | 33198649 | Polycystin cation channel, PKD1/PKD2 [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0456s00009.1 | 33199038 | Hypothetical protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003994 | aconitate hydratase activity | IEP | Enrichment |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005685 | U1 snRNP | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006376 | mRNA splice site selection | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| CC | GO:0016459 | myosin complex | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030286 | dynein complex | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013122 | PKD1_2_channel | 200 | 332 |
| No external refs found! |