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  5. SymbC1.scaffold5818.2

SymbC1.scaffold5818.2 (5818.2)


Aliases : 5818.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5818.2
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold563.11 563.11 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold7358.3 7358.3 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold8446.2 8446.2 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold945.1 945.1 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 70 323
No external refs found!