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  5. Cpa|evm.model.tig00020614.45

Cpa|evm.model.tig00020614.45 (tig00020614_g12158.t1)


Aliases : tig00020614_g12158.t1

Description : Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0002692 (OrthoFinder) Phylogenetic Tree(s): OG0002692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.45
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000566.1_cds_GFH13019.1_7496 HaLaN_08818, GFH13019 Thiamine pyrophosphate (TPP)-dependent enzyme 0.02 OrthoFinder
lcl|BLLF01000566.1_cds_GFH13021.1_7498 HaLaN_08820, GFH13021 Thiamine pyrophosphate enzyme, central domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000566.1_cds_GFH13022.1_7499 HaLaN_08821, GFH13022 Thiamine pyrophosphate enzyme, C-terminal TPP-binding 0.03 OrthoFinder
lcl|BLLF01003877.1_cds_GFH28434.1_22911 HaLaN_26923, GFH28434 Mitochondrial pyruvate dehydrogenase complex, E1... 0.02 OrthoFinder
lcl|BLLF01003877.1_cds_GFH28435.1_22912 HaLaN_26924, GFH28435 Thiamine pyrophosphate enzyme, C-terminal TPP-binding... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 241 337
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 48 220
IPR011766 TPP_enzyme-bd_C 443 507
No external refs found!