1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold58.1

SymbC1.scaffold58.1 (58.1)


Aliases : 58.1

Description : EF-hand domain pair; Ion transport domain [Interproscan].


Gene families : OG_01_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold58.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.83 tig00021127_g18760.t1 No description available 0.01 OrthoFinder
SymbC1.scaffold2884.7 2884.7 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold649.10 649.10 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9326.1 9326.1 EF-hand domain; Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 29 244
No external refs found!