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  5. SymbC1.scaffold5748.1

SymbC1.scaffold5748.1 (5748.1)


Aliases : 5748.1

Description : Chloride channel, voltage gated; CBS domain [Interproscan].


Gene families : OG_01_0000175 (OrthoFinder) Phylogenetic Tree(s): OG0000175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5748.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001126.4 tig00001126_g7116.t1 Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz06g20220.t1 No alias Chloride channel, voltage gated; CBS domain [Interproscan]. 0.01 OrthoFinder
EOD16543 No alias Voltage gated chloride channel [Ensembl]. 0.02 OrthoFinder
Vocar.0008s0328.1 32897022 Chloride channel, voltage gated; CBS domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57241.1_9221 PRW57241 Acetyl-hydrolase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR000644 CBS_dom 669 719
IPR001807 Cl-channel_volt-gated 890 1255
IPR001807 Cl-channel_volt-gated 169 549
No external refs found!