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  5. SymbC1.scaffold563.11

SymbC1.scaffold563.11 (563.11)


Aliases : 563.11

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold563.11
Cluster HCCA: Cluster_796

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10275.2 10275.2 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold11359.2 11359.2 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold1217.3 1217.3 Leucine rich repeat 4; Leucine-rich repeat; Ion... 0.01 OrthoFinder
SymbC1.scaffold1495.1 1495.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold5818.2 5818.2 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold66.25 66.25 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7338.1 7338.1 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold8446.2 8446.2 Ion transport domain [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold945.1 945.1 Ion transport domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 185 351
No external refs found!