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  5. SymbC1.scaffold5624.1

SymbC1.scaffold5624.1 (5624.1)


Aliases : 5624.1

Description : Sodium/solute symporter [Interproscan].


Gene families : OG_01_0001209 (OrthoFinder) Phylogenetic Tree(s): OG0001209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5624.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre08.g360250 30773405, DUR4 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001734 Na/solute_symporter 1 111
No external refs found!