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  5. SymbC1.scaffold5416.2

SymbC1.scaffold5416.2 (5416.2)


Aliases : 5416.2

Description : Major facilitator, sugar transporter-like; Ribosomal protein S19/S15 [Interproscan].


Gene families : OG_01_0001210 (OrthoFinder) Phylogenetic Tree(s): OG0001210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5416.2
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.61 tig00020830_g14444.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cre08.g360900 30773772, RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz15g01190.t1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.04 OrthoFinder
Dusal.0059s00011.1 33203224 Ribosomal protein S19/S15 [Interproscan]. 0.04 OrthoFinder
OT_12G02670.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
PTI_06G03210.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.06 OrthoFinder
Sro1505_g278180.1 Contig474.g6440 40S ribosomal protein S15 0.06 OrthoFinder
TP03G03270.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.05 OrthoFinder
Vocar.0021s0199.1 32896013 Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
XM_002507550.1 MICPUN_89585, 89585 Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
XM_003054821.1 MicpuC2_30685, 30685 Ribosomal protein S19/S15 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33918.1_2873 PRW33918 40S ribosomal S15 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500014.1_8967 KAA8500014 40S ribosomal protein S15 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 946 1031
IPR005828 MFS_sugar_transport-like 41 222
No external refs found!