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  5. SymbC1.scaffold5248.2

SymbC1.scaffold5248.2 (5248.2)


Aliases : 5248.2

Description : Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal [Interproscan].


Gene families : OG_01_0000078 (OrthoFinder) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5248.2
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold396.9 396.9 Beta-ketoacyl synthase, N-terminal; Polyketide synthase,... 0.02 OrthoFinder
XM_003055896.1 MicpuC2_7173, 7173 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
XM_003055898.1 MicpuC2_13836, 13836 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
lcl|BLLF01000904.1_cds_GFH15811.1_10288 HaLaN_12116, GFH15811 Type I polyketide synthase 0.01 OrthoFinder
lcl|BLLF01001312.1_cds_GFH18519.1_12996 HaLaN_15340, GFH18519 Beta-ketoacyl synthase, N-terminal [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58009.1_8753 PRW58009 Type I fatty acid 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR014030 Ketoacyl_synth_N 220 464
IPR014031 Ketoacyl_synth_C 473 588
No external refs found!