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  5. SymbC1.scaffold5190.4

SymbC1.scaffold5190.4 (5190.4)


Aliases : 5190.4

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0002136 (OrthoFinder) Phylogenetic Tree(s): OG0002136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5190.4
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10060.1 10060.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold2085.3 2085.3 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold460.5 460.5 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold467.3 467.3 Peptidase family A1 domain; Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold5833.4 5833.4 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 358 595
No external refs found!