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  5. SymbC1.scaffold5166.4

SymbC1.scaffold5166.4 (5166.4)


Aliases : 5166.4

Description : C-5 cytosine methyltransferase [Interproscan].


Gene families : OG_01_0000252 (OrthoFinder) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5166.4
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold11488.1 11488.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold13843.1 13843.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold16042.1 16042.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold2033.1 2033.1 C-5 cytosine methyltransferase [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold222.7 222.7 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold4835.3 4835.3 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold5008.2 5008.2 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold5411.1 5411.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold6587.2 6587.2 C-5 cytosine methyltransferase [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold8296.1 8296.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8368.1 8368.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold9966.1 9966.1 C-5 cytosine methyltransferase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 498 624
No external refs found!