1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold5148.3

SymbC1.scaffold5148.3 (5148.3)


Aliases : 5148.3

Description : Annexin repeat [Interproscan].


Gene families : OG_01_0002576 (OrthoFinder) Phylogenetic Tree(s): OG0002576_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5148.3
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Dusal.0431s00002.1 33195520 Annexin repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005544 calcium-dependent phospholipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR018502 Annexin_repeat 259 321
IPR018502 Annexin_repeat 141 175
IPR018502 Annexin_repeat 187 250
No external refs found!