SymbC1.scaffold5.904 (5.904)

Aliases : 5.904

Description : Pyruvate phosphate dikinase, AMP/ATP-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, C-terminal; Conserved hypothetical protein CHP02453; YTV; Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant [Interproscan].

Gene families : OG_01_0000556 (OrthoFinder) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold5.904
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020554.169	tig00020554_g10949.t1	Pyruvate, phosphate dikinase 1, chloroplastic OS=Oryza...	0.01	OrthoFinder
SymbC1.scaffold4.435	4.435	PEP-utilising enzyme, mobile domain; ABC...	0.04	OrthoFinder
lcl\|BLLF01000501.1_cds_GFH12411.1_6888	HaLaN_08096, GFH12411	Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016209	antioxidant activity	IEA	Interproscan
MF	GO:0016301	kinase activity	IEA	Interproscan
BP	GO:0016310	phosphorylation	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
BP	GO:0000270	peptidoglycan metabolic process	IEP	Enrichment
MF	GO:0003796	lysozyme activity	IEP	Enrichment
MF	GO:0003842	1-pyrroline-5-carboxylate dehydrogenase activity	IEP	Enrichment
MF	GO:0004325	ferrochelatase activity	IEP	Enrichment
MF	GO:0004470	malic enzyme activity	IEP	Enrichment
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
BP	GO:0006022	aminoglycan metabolic process	IEP	Enrichment
BP	GO:0006026	aminoglycan catabolic process	IEP	Enrichment
BP	GO:0006027	glycosaminoglycan catabolic process	IEP	Enrichment
BP	GO:0006783	heme biosynthetic process	IEP	Enrichment
MF	GO:0008452	RNA ligase activity	IEP	Enrichment
MF	GO:0008716	D-alanine-D-alanine ligase activity	IEP	Enrichment
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Enrichment
BP	GO:0009253	peptidoglycan catabolic process	IEP	Enrichment
CC	GO:0015627	type II protein secretion system complex	IEP	Enrichment
BP	GO:0015628	protein secretion by the type II secretion system	IEP	Enrichment
MF	GO:0016615	malate dehydrogenase activity	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
BP	GO:0030203	glycosaminoglycan metabolic process	IEP	Enrichment
MF	GO:0031419	cobalamin binding	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
MF	GO:0061783	peptidoglycan muralytic activity	IEP	Enrichment
MF	GO:0070402	NADPH binding	IEP	Enrichment
BP	GO:0071806	protein transmembrane transport	IEP	Enrichment
BP	GO:0098776	protein transport across the cell outer membrane	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011521	YTV	149	189
IPR011521	YTV	322	355
IPR011521	YTV	163	202
IPR011521	YTV	179	220
IPR011521	YTV	77	113
IPR011521	YTV	103	143
IPR011521	YTV	133	173
IPR011521	YTV	352	386
IPR002192	PPDK_AMP/ATP-bd	1113	1173
IPR002192	PPDK_AMP/ATP-bd	826	1100
IPR000866	AhpC/TSA	1916	2026
IPR000121	PEP_util_C	1333	1393
IPR000121	PEP_util_C	1399	1615
IPR012808	CHP02453	528	730
IPR008279	PEP-util_enz_mobile_dom	1238	1319

External Links

No external refs found!

SymbC1.scaffold5.904 (5.904)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation