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  5. SymbC1.scaffold5.776

SymbC1.scaffold5.776 (5.776)


Aliases : 5.776

Description : Xylose isomerase-like, TIM barrel domain; NADPH-dependent FMN reductase-like [Interproscan].


Gene families : OG_01_0017031 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5.776
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold24315.1 24315.1 Uncharacterised protein family HicB [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR005025 FMN_Rdtase-like 796 872
IPR013022 Xyl_isomerase-like_TIM-brl 74 233
No external refs found!