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  5. Cpa|evm.model.tig00020604.12

Cpa|evm.model.tig00020604.12 (tig00020604_g11847.t1)


Aliases : tig00020604_g11847.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor


Gene families : OG_01_0004112 (OrthoFinder) Phylogenetic Tree(s): OG0004112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020604.12
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre08.g370601 30774105 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
EOD27130 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.02 OrthoFinder
OT_05G01480.1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.07 OrthoFinder
PTI_12G00600.1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.05 OrthoFinder
Sro767_g199410.1 Contig2377.g19529 Nucleolar ribonucleoprotein protein MPP10 0.05 OrthoFinder
XM_003056286.1 MicpuC2_70680, 70680 U3 small nucleolar ribonucleoprotein component (MPP10) 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59087.1_7023 PRW59087 U3 small nucleolar ribonucleo MPP10-like isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR012173 Mpp10 36 635
No external refs found!