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  5. SymbC1.scaffold4630.2

SymbC1.scaffold4630.2 (4630.2)


Aliases : 4630.2

Description : Methylenetetrahydrofolate reductase; Serine hydroxymethyltransferase-like domain [Interproscan].


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold4630.2
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Sro1018_g231910.1 Contig4480.g33673 Serine hydroxymethyltransferase 0.02 OrthoFinder
Transcript_contig_78586 78586 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEA Interproscan
BP GO:0006555 methionine metabolic process IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 376 764
IPR003171 Mehydrof_redctse-like 21 333
No external refs found!