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  5. SymbC1.scaffold462.4

SymbC1.scaffold462.4 (462.4)


Aliases : 462.4

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0001854 (OrthoFinder) Phylogenetic Tree(s): OG0001854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold462.4
Cluster HCCA: Cluster_554

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold397.2 397.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold4479.4 4479.4 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold6515.3 6515.3 EF-hand domain; EF-hand domain pair; Ion transport... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 67 314
IPR002048 EF_hand_dom 334 355
IPR002048 EF_hand_dom 381 398
No external refs found!