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  5. Cpa|evm.model.tig00020603.38

Cpa|evm.model.tig00020603.38 (tig00020603_g11769.t1)


Aliases : tig00020603_g11769.t1

Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG_01_0000899 (OrthoFinder) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020603.38
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Vocar.0019s0059.1 32892850 Tubby, C-terminal [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0112.1 32897492 Tubby, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_002508873.1 MICPUN_63330, 63330 Tubby-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 55 138
IPR000007 Tubby_C 375 457
IPR000007 Tubby_C 272 353
No external refs found!