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  5. SymbC1.scaffold45.13

SymbC1.scaffold45.13 (45.13)


Aliases : 45.13

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0003194 (OrthoFinder) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold45.13
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1323.3 1323.3 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold5575.7 5575.7 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold9584.1 9584.1 Ion transport domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 102 337
No external refs found!