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  5. SymbC1.scaffold441.8

SymbC1.scaffold441.8 (441.8)


Aliases : 441.8

Description : C-5 cytosine methyltransferase; Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0001031 (OrthoFinder) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold441.8
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1085.2 1085.2 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold3468.5 3468.5 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0051180 vitamin transport IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1879 1937
IPR001525 C5_MeTfrase 1173 1307
No external refs found!