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  5. SymbC1.scaffold4372.3

SymbC1.scaffold4372.3 (4372.3)


Aliases : 4372.3

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0003201 (OrthoFinder) Phylogenetic Tree(s): OG0003201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4372.3
Cluster HCCA: Cluster_792

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2840.10 2840.10 Ion transport domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 370 391
IPR002048 EF_hand_dom 414 435
IPR005821 Ion_trans_dom 106 348
No external refs found!