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  5. SymbC1.scaffold4302.2

SymbC1.scaffold4302.2 (4302.2)


Aliases : 4302.2

Description : Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan].


Gene families : OG_01_0000480 (OrthoFinder) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4302.2
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000053.15 tig00000053_g23498.t2 Protein MEI2-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz07g28030.t1 No alias Mei2/Mei2-like, C-terminal RNA recognition motif; RNA... 0.01 OrthoFinder
Dusal.0138s00015.1 33197022 Mei2/Mei2-like, C-terminal RNA recognition motif; RNA... 0.02 OrthoFinder
EOD31318 No alias Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.01 OrthoFinder
EOD41019 No alias Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.01 OrthoFinder
OT_05G01690.1 No alias Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2021.5 2021.5 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6078.3 6078.3 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold620.11 620.11 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6462.2 6462.2 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold7443.2 7443.2 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7515.4 7515.4 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7911.2 7911.2 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7941.2 7941.2 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 114 208
No external refs found!