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  5. SymbC1.scaffold4142.3

SymbC1.scaffold4142.3 (4142.3)


Aliases : 4142.3

Description : Conserved hypothetical protein 95; PAN/Apple domain [Interproscan].


Gene families : OG_01_0010082 (OrthoFinder) Phylogenetic Tree(s): OG0010082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4142.3
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro352_g124180.1 Contig2645.g21394 Methylates the class 1 translation termination release... 0.01 OrthoFinder
TP14G00110.1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003609 Pan_app 774 810
No external refs found!